The discovery of cell-free circulating tumor DNA (crDNA) in blood and the maturation of technologies for ctDNA analysis have presented an attractive opportunity for minimally invasive "liquid biopsy" genomic diagnostics. The investigators plan to perform EUS-guided portal vein and hepatic vein aspiration in GI cancers patients. The aim of the current study is thus to examine the concentration of ctDNA in portal vein (EUS-guided PVA), hepatic vein (EUS-guided HVA) and peripheral blood to understand the first pass effect of the liver with gastrointestinal (GI) cancers, and the possibility of using ctDNA as a marker for preoperative staging, restaging after neoadjuvant chemotherapy, and monitoring for recurrence.
The discovery of cell-free circulating tumor DNA (crDNA) in blood and the maturation of technologies for ctDNA analysis have presented an attractive opportunity for minimally invasive "liquid biopsy" genomic diagnostics. The investigators plan to perform EUS-guided portal vein and hepatic vein aspiration in GI cancers patients. The aim of the current study is thus to examine the concentration of ctDNA in portal vein (EUS-guided PVA), hepatic vein (EUS-guided HVA) and peripheral blood to understand the first pass effect of the liver with gastrointestinal (GI) cancers, and the possibility of using ctDNA as a marker for preoperative staging, restaging after neoadjuvant chemotherapy, and monitoring for recurrence.
Study Type
INTERVENTIONAL
Allocation
NA
Purpose
DIAGNOSTIC
Masking
NONE
Enrollment
60
EUS-guided portal vein and hepatic vein aspiration
The Chinese University of Hong Kong
Hong Kong, Hong Kong
RECRUITINGVariant allelic fraction (expressed in %) of serum ctDNA from HVB, PVB and peripheral blood
Plasma DNA will be extracted using the QIAamp Circulating Nucleic Acid Kit (Qiagen), and the concentration of the circulating tumor DNA will be reported in variant allelic fraction (expressed in %)
Time frame: 3 months
Variant allelic fraction (expressed in %) of Genomic and proteomic analysis of ctDNA
If ctDNA is identified, further genomic and proteomic analysis will be performed. It will be measured in terms variant allelic fraction (expressed in %)
Time frame: 3 months
Staging of the GI cancer
The pathological TNM staging of the resected specimen will be recorded.
Time frame: 3 months
Recurrence
any recurrence of the tumor will be recorded
Time frame: 5 years
Overall survival
overall survival will be recorded
Time frame: 5 years
Progression-free survival
progression free survival will be recorded
Time frame: 5 years
Technical success rate of EUS-PVA and HVA
The technical success rate of the EUS guided procedure will be recorded. Reasons for failure of the cases will be recorded.
Time frame: 1 day
Adverse events of EUS-PVA and HVA
the adverse events of the EUS procedure will be recorded
Time frame: 30 days
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