Prospective study to decipher the clonal architecture of ASXL1-mutated primary and secondary myelofibrosis and its impact on prognosis
The clonal architecture of myelofibrosis patients is still little described. Inconsistent results in terms of the prognostic value of some mutations are observed in the literature, in particular concerning ASXL1 mutations. We assume that a better understanding of the clonal architecture of ASXL1-mutated myelofibrosis could help refining the prognostic impact of ASXL1 mutations. This study aims to evaluate a multicenter cohort of 50 patients. Blood of patients will be collected within 18 months of diagnosis. After 4 years of follow-up of the patient as part of his usual care, data on survival and leukemic transformation will be collected.
Study Type
INTERVENTIONAL
Allocation
NA
Purpose
OTHER
Masking
NONE
Enrollment
50
Biological: * Determination of clonal architecture by sorting of circulating CD34 positive cells followed by cell culture and colony genotyping and/or single-cell DNA-sequencing * Secondary outcome: transcriptomic study by RNA-sequencing
CHU Angers
Angers, France
RECRUITINGCHRU Brest
Brest, France
NOT_YET_RECRUITINGCH Cholet
Identify subgroups of ASXL1-mutated myelofibrosis based on clonal architecture data
The clonal architecture is defined by the number of mutations (numerical), the order of acquisition of the mutations (categorial, pre/post/separated), the mutational branching (categorial, yes/no), the presence of distinct clones (categorial, yes/no) and the transition towards homozygosity of each clone (categorial, yes/no). All parameters of clonal architecture will be analyzed together using a multivariate classification (Factor Analysis for Mixed Data) followed by a clustering which allow us to identify homogeneous cluster of patients.
Time frame: 24 months
Description of previously constituted prognostic genomic groups (according to Luque Paz et al. 2021) within identified clusters of clonal architecture
The repartition of patients onto genomic groups will be reported for each clusters of clonal architecture (number and percentage).
Time frame: 24 months
Studying the functional characteristics of each subtype of clonal architecture by transcriptomics
Gene Set Enrichment Analysis (GSEA) will be performed for each cluster of clonal architecture
Time frame: 24 months
Comparison of male proportion within the subtypes of clonal architecture
Repartition of gender will be compared
Time frame: 24 months
Comparison of age at the time of diagnosis within the subtypes of clonal architecture
Age at the time (years) of diagnosis will be compared
Time frame: 24 months
Comparison of blood counts within the subtypes of clonal architecture
Blood counts (g/dL or G/L) at the time of diagnosis will be compared
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Cholet, France
CHU Henri MONDOR
Créteil, France
RECRUITINGInstitut Paoli Calmettes
Marseille, France
RECRUITINGCHU Nantes
Nantes, France
NOT_YET_RECRUITINGAP-HP Hôpital Saint Louis
Paris, France
NOT_YET_RECRUITINGHôpital Bicêtre
Paris, France
RECRUITINGCHU de Bordeaux
Pessac, France
RECRUITINGCHU Lyon
Pierre-Bénite, France
RECRUITING...and 3 more locations
Time frame: 24 months
Comparison of LDH levels within the subtypes of clonal architecture
LDH levels (UI/L) at the time of diagnosis will be compared
Time frame: 24 months
Comparison of splenomegaly proportion within the subtypes of clonal architecture
Proportion of patients with splenomegaly will be compared
Time frame: 24 months
Comparison of constitutional symptoms proportion within the subtypes of clonal architecture
Proportion of patients with constitutional symptoms will be compared
Time frame: 24 months
Evaluation of overall survival of the patients at 4 years according to their clonal architecture profile
Overall survival will be evaluated by Cox models
Time frame: 72 months
Evaluation of the leukemia-free survival of the patients at 4 years according to their clonal architecture profile
Leukemia-free survival will be evaluated by Cox models
Time frame: 72 months