Myeloproliferative Neoplasms (MPN) are hematological malignancies characterized by the excessive production of myeloid cells. MPN can be complicated by thrombosis and evolution into more aggressive diseases (myelofibrosis and acute leukemia). Aging remains the principal factor determining patients' survival in MPN. In recent years, DNA methylation has appeared as a mean to measure aging via the development of epigenetic clocks that have also been associated with the occurrence of thrombosis and cancer. The epiC project aims at determining epigenetic age of MPN patients and search for an association between this parameter and thrombotic/hematological complications.
Myeloproliferative Neoplasia (MPN) are hematological malignancies characterized by the excessive production of myeloid cells. They include Essential Thrombocythemia (ET), Polycythemia Vera (VP) and Primary Myelofibrosis (PMF). Thrombosis are the most frequent complications and are largely responsible for the morbidity and mortality observed in ET and PV patients. The most feared complications are hematological transformations (into myelofibrosis for PV and ET, into acute myeloid leukemia for PV, ET and PMF). The prognostic assessment of MPN patients is mainly based on clinical data. Although recent studies have shown that certain mutations are associated with a poorer prognosis, age remains the main risk factor affecting survival in MPN patients. Recent studies have shown that DNA methylation can be used to determine an "epigenetic age". Interestingly, this epigenetic age is associated with the development of cardiovascular disease and cancer. In this project, the epigenetic age of MPN patients will be determined by studying the DNA methylation at diagnosis using the Infinium Human MethylationEPIC kit (Illumina). Epigenetic age will be determined with the most commonly used epigenetic clocks (DNAmAge, DNAmHannum, DNAmPhenoAge, DNAmSkinClock, DNAmGrimAge, intrinsic epigenetic age acceleration, extrinsic epigenetic age acceleration). It will be searched for an association between accelerated epigenetic aging (as assessed by the difference between epigenetic age and chronological age) and the type of MPN, the clinical and biological presentation at diagnosis (including the mutational profile of patients) and the occurrence of thrombosis and hematological evolution into myelofibrosis and/or acute leukemia.
Study Type
OBSERVATIONAL
Enrollment
120
Retrospective assessment of the epigenetic age on DNA samples obtained at diagnosis
CHU de Bordeaux, service Hématologie Biologique
Bordeaux, France
RECRUITINGAccelerated ageing of patients
Accelerated ageing will be defined as an increased difference between the epigenetic age (calculated from DNA methylation data with the different molecular clocks described: DNAmAge, DNAmHannum, DNAmPhenoAge, DNAmSkinClock, DNAmGrimAge, intrinsic epigenetic age acceleration, extrinsic epigenetic age acceleration) and the chronological age
Time frame: At inclusion, up to 1 year after diagnosis
Type of MPN (ET, PV or PMF) at diagnosis
We will study patients with a diagnosis of ET, PV or PMF as defined by the WHO classification of hematological malignancies
Time frame: At inclusion, up to 1 year after diagnosis
Transformation into secondary myelofibrosis or acute leukemia
Evolution toward secondary myelofibrosis or acute leukemia will be defined according to the WHO classification of hematological malignancies
Time frame: From date of inclusion until documentation of the event, assessed up to 5 years
Occurrence of thrombosis prior to diagnosis or during follow-up of the disease
Occurrence of myocardial infarction, ischemic stroke, deep vein thrombosis, pulmonary embolism, splanchnic thrombosis or any other significant thrombosis. Tinnitus, vertigo, headaches, erythromelalgia as well as superficial vein thrombosis will not be considered as thrombotic events
Time frame: Between 1 year before and 2 years after MPN diagnosis
Leukocytes
Leukocytes level on blood count in G/L
Time frame: At inclusion, up to 1 year after diagnosis
Platelets
Platelet level on blood count in G/L
Time frame: At inclusion, up to 1 year after diagnosis
Granulocytes
Granulocytes level on blood count in G/L
Time frame: At inclusion, up to 1 year after diagnosis
Monocytes
Monocytes level on blood count in G/L
Time frame: At inclusion, up to 1 year after diagnosis
Hemoglobin
Hemoglobin level on blood count in g/dL
Time frame: At inclusion, up to 1 year after diagnosis
Hematocrit
Hematocrit level on blood count in %
Time frame: At inclusion, up to 1 year after diagnosis
Additional somatic mutation
In up to 50% of MPN patients, genetic variants can be detected in genes such as DNMT3A, TET2, ASXL1, SRSF2, SF3B1, U2AF1, EZH2 or TP53. We will determine which somatic genetic variant is detected by high throughput sequencing
Time frame: At inclusion, up to 1 year after diagnosis
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