Few studies have focused on malaria co-infections, mainly caused by Plasmodium falciparum, occurring mainly in children under 5 years of age in sub-Saharan Africa. These studies have focused on malaria-associated bacterial sepsis, with an estimated prevalence of 9.1% and associated mortality of 15.0%. However, no study has documented infectious sites other than the blood compartment, considered viruses and parasites as possible causes of infection in addition to bacteria, and used molecular diagnostic methods based on PCRs, which are more sensitive. Thus, the prevalence of these co-infections and the spectrum of pathogens involved are probably underestimated, as is the impact of these co-infections on mortality. Furthermore, it has been shown that malaria infections can condition the immune cells of naturally exposed individuals, potentially leading to greater susceptibility to all types of infection. But these mechanisms have never been documented in the context of co-infections. The WHO recommends the use of broad-spectrum antibiotics in cases of severe malaria, in addition to antimalarial drugs, as it can be difficult to differentiate clinically between severe malaria and severe bacterial infection (bacteremia, pneumonia and meningitis). Yet this empirical use of antibiotics could be contributing to an increase in antibiotic resistance. Identifying the determinants of co-infection with malaria and severe bacterial infection would enable this treatment to be better targeted. These determinants remain undetermined as no study has considered other causes of severe bacterial infection other than bacteremia, used appropriate statistical methodology (univariate analysis only) and explored important determinants, notably the capacity of children's innate immunity to respond to severe bacterial infection.
This is a prospective multicenter longitudinal study. The study will focus on several populations: * febrile children: aged between 6 and 60 months consulting ; * non-febrile children: aged between 6 and 60 months consulting. * Pregnant women. * newborns: those born to mothers included in the study with or without pregnancy-associated malaria. The study will be based on : * Clinical and microbiological documentation of acute febrile episodes in recruited children * Documentation of vital status in children 3 months after recruitment * Ability of host cells to respond to infections.
Study Type
INTERVENTIONAL
Allocation
NA
Purpose
BASIC_SCIENCE
Masking
NONE
Enrollment
2,000
For febrile children at the time of inclusion : 6.25 ml to 8.25 ml of blood ; For non febrile children at the time of inclusion : 4 ml of blood ; For pregnant women at the time of inclusion : 5 ml of peripheral blood, 5 ml of placental blood, 20 to 40 ml of umbilical cord blood ; For new borns : drop of blood on child's heel each month and 5 ml of blood the 12th and last month.
For febrile children : 10 ml of urine
For febrile children : oropharyngeal swab sampling
For febrile children (only as part of the care of the child) : 5g stool
For febrile children (only as part of the care of the child in case of suspected meningitis) : 4 additional drops of cerebrospinal fluid
For pregnant women : placental biopsy the size of 2 rice grains
Determine the extent and microbiological spectrum of malaria co-infections in children under 5.
the number of malaria co-infection events in febrile children.
Time frame: 3 years
Assess the impact of malaria co-infections on mortality
Number of deaths in children under 5 with malaria co-infection
Time frame: 2 years
Identify the underlying immunological mechanisms mediating malaria co-infections
Concentration of cytokines IL6, IL1β and TNFα and IL 10 in children under 5 years of age
Time frame: 2 years
Identify epigenetic and transcriptomic modifications in infant, maternal and placental blood cells mediating malaria co-infections
Expression level of transcripts according to the populations studied will be measured by RNA-seq
Time frame: 2 years
Identify molecules associated with epigenetic modifications (metabolome, proteome).
Expression level of proteins and metabolites according to the populations studied will be measured by RNA-seq
Time frame: 2 years
Identify determinants of malaria co-infections and severe bacterial infections.
The number of malaria co-infection events associated with severe bacterial infection in febrile children under 5 years of age.
Time frame: 2 years
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