The goal of this clinical trial is to learn if an antisense oligonucleotide (TS1-ASO) can safely treat and potentially prevent neuropsychiatric and neurodevelopmental symptoms in pediatric participants (age \>2 months) with Timothy Syndrome Type 1 (TS1). The main questions it aims to answer are: 1. Is TS1-ASO safe and well tolerated when administered intrathecally in children with TS1? 2. What are the pharmacokinetics and preliminary efficacy of TS1-ASO on neurodevelopmental and neurologic outcomes? This is a single-arm study (no comparison group). Participants will: 1. Receive intrathecal injections of TS1-ASO via lumbar puncture using a stepwise dose-escalation approach 2. Undergo safety monitoring including neurologic exams, cardiac monitoring, laboratory testing, and adverse event assessments 3. Provide cerebrospinal fluid (CSF) and blood samples for pharmacokinetic and biomarker analyses 4. Complete neurodevelopmental, behavioral, and functional assessments (e.g., adaptive behavior, motor function, communication, seizure tracking) over time
Timothy Syndrome Type 1 (TS1) is an ultra-rare, life-threatening autosomal dominant disorder caused by a pathogenic gain-of-function variant (p.G406R) in exon 8A of the CACNA1C gene, which encodes the CaV1.2 L-type calcium channel. The condition is characterized by multisystem involvement, including cardiac arrhythmias (long QT syndrome), syndactyly, hypoglycemia, and a high prevalence of neurodevelopmental and neuropsychiatric manifestations such as autism spectrum disorder, epilepsy, and global developmental delay. While advances in cardiac management have improved survival, there are currently no disease-modifying therapies targeting the neurologic and developmental features of TS1, representing a critical unmet medical need. This first-in-human Phase I/II study evaluates TS1-ASO, an investigational antisense oligonucleotide designed to modulate pre-Messenger RNA (mRNA) splicing of CACNA1C by reducing inclusion of exon 8A and promoting expression of exon 8. This targeted approach aims to correct the underlying molecular mechanism driving abnormal calcium signaling. Preclinical studies in human induced pluripotent stem cell-derived neural organoids, assembloids, and in vivo transplantation models have demonstrated that TS1-ASO achieves target engagement, normalizes calcium channel function, and rescues disease-relevant cellular phenotypes. Toxicology studies in rodents and juvenile nonhuman primates support a favorable safety profile with no dose-limiting toxicities observed at clinically relevant exposures. The study employs a non-randomized, open-label, sequential dose-escalation design in a small cohort of pediatric participants with genetically confirmed TS1. Dosing is administered intrathecally via lumbar puncture to achieve direct central nervous system exposure, consistent with established delivery approaches for antisense oligonucleotide therapies in neurologic disorders. Dose selection and escalation are guided by cerebrospinal fluid (CSF) volume-based scaling from nonclinical models, incorporating a conservative, stepwise approach to achieve pharmacologically active Central Nervous System (CNS) concentrations while maintaining safety margins. Participants undergo intensive safety monitoring, including continuous cardiac telemetry during dosing periods, serial electrocardiograms, neurologic assessments, and comprehensive laboratory evaluations. Pharmacokinetic sampling in CSF and plasma is conducted to characterize drug distribution and exposure. Pharmacodynamic assessments include measurement of CACNA1C exon 8/8A splicing in CSF as a marker of target engagement. Clinical outcome assessments span multiple domains of neurodevelopment and function, including adaptive behavior, motor skills, communication, seizure frequency (where applicable), and caregiver- and clinician-reported measures. Given the ultra-rare nature of TS1 and limited patient population, the study is designed to generate descriptive safety, pharmacokinetic, and exploratory efficacy data to inform future development. The study includes a staged enrollment approach with interim safety reviews to ensure appropriate risk mitigation. Longitudinal follow-up allows for assessment of durability of response and continued safety evaluation over time. This trial represents a precision medicine approach targeting the molecular basis of TS1 and is intended to establish foundational clinical data for a novel therapeutic strategy addressing neurodevelopmental disease in this population.
Study Type
INTERVENTIONAL
Allocation
NA
Purpose
PREVENTION
Masking
NONE
Enrollment
5
Antisense oligonucleotide targeting CACNA1C exon 8A/8 splicing
Stanford University
Stanford, California, United States
Incidence, frequency, and severity of adverse events (AEs) and serious adverse events (SAEs) from first dose through 12 months of treatment and follow-up.
Safety and tolerability of TS1-ASO will be evaluated by systematic collection and analysis of AEs and SAEs following intrathecal administration. Events will be graded according to the National Cancer Institute Common Terminology Criteria for Adverse Events (CTCAE) version 5.0 and assessed for severity, seriousness, and relationship to study drug and procedure. Safety assessments include continuous cardiac monitoring (telemetry), serial electrocardiograms, neurologic examinations, and routine laboratory evaluations (hematology, chemistry, coagulation, and urinalysis). Procedure-related safety (e.g., lumbar puncture complications), neurologic status, and potential class-related effects of antisense oligonucleotides will be closely monitored. Data will be summarized descriptively to characterize the overall safety profile of TS1-ASO in this population.
Time frame: From the first dose through 12 months of treatment and follow-up.
Pharmacokinetic (PK) profile of TS1-ASO in cerebrospinal fluid (CSF).
Pharmacokinetic parameters of TS1-ASO will be characterized using serial CSF samples collected at predefined time points following intrathecal administration. Parameters include maximum concentration (Cmax).
Time frame: From first dose through 12 months of treatment
Pharmacokinetic (PK) profile of TS1-ASO in plasma.
Pharmacokinetic parameters of TS1-ASO will be characterized using plasma samples collected at predefined time points following intrathecal administration. Parameters include time to maximum concentration (Tmax).
Time frame: From first dose through 12 months of treatment
Change in CACNA1C exon 8/8A splicing in CSF
Pharmacodynamic activity will be assessed by measuring the ratio of exon 8 to exon 8A transcripts in CSF using quantitative polymerase chain reaction (qPCR). Changes from baseline will be used to evaluate target engagement and biological activity of TS1-ASO in modulating RNA splicing.
Time frame: From Baseline through 12 months.
Seizure frequency (in participants with epilepsy)
Seizure frequency will be assessed using caregiver-reported daily seizure logs. Changes in seizure frequency over time will be evaluated to explore potential treatment effects on neurologic outcomes.
Time frame: From Baseline through 12 months.
Change in adaptive behavior (Vineland Adaptive Behavior Scales Third Edition - Vineland-3)
Adaptive functioning will be measured using the Vineland Adaptive Behavior Scales Third Edition (Vineland-3). Changes in composite and domain scores (communication, daily living skills, socialization, and motor skills) will be assessed to evaluate developmental progress.
Time frame: From Baseline through 12 months.
Change in gross motor function (Gross Motor Function Classification System - Expanded & Revised)
Gross motor function will be evaluated using the Gross Motor Function Classification System Expanded \& Revised (GMFCS-E\&R). Changes in classification level over time will be used to assess motor development and functional mobility.
Time frame: From Baseline through 12 months.
Change in communication function (Communication Function Classification System)
Communication abilities will be assessed using the Communication Function Classification System (CFCS). Changes in classification level will be evaluated to assess expressive and receptive communication function.
Time frame: From Baseline through 12 months.
Change in early language development - MacArthur-Bates Communicative Development Inventories (MB-CDIs)
In younger participants or those with communication delays, language development will be assessed using the MacArthur-Bates Communicative Development Inventories (MB-CDIs). Changes from baseline will be used to evaluate early communication and language acquisition.
Time frame: From Baseline through 12 months
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